MRIQC: individual T1w report

Summary

• Subject ID: 0003.
• Date and time: 2017-08-09, 18:17.
• MRIQC version: 0.9.7.
• Workflow details:
  • Detected a zero-filled frame, has the original image been rotated?
  • File has no metadata (sidecar JSON file missing or empty)
• Image parameters:

  cjv			0.30783526950785833
  cnr			4.206527282946631
  efc			0.6730350322847438
  fber			19.53189468383789
  fwhm	avg		3.5334095555555556
  fwhm	x		3.4172266666666666
  fwhm	y		3.681472
  fwhm	z		3.50153
  icvs	csf		0.24151769688326472
  icvs	gm		0.4222688109758763
  icvs	wm		0.336213492140859
  inu	med		1.496488094329834
  inu	range		0.2629909813404083
  qi	1		0.0
  qi	2		0.0004868274160519931
  rpve	csf		18.255645819093782
  rpve	gm		10.612943645328226
  rpve	wm		16.559573117461834
  size	x		256
  size	y		256
  size	z		162
  snr	csf		2.50601002682856
  snr	gm		8.226228597718137
  snr	total		9.180190392072403
  snr	wm		16.80833255167051
  snrd	csf		6.853141928720625
  snrd	gm		13.87828971124026
  snrd	total		14.762975942068271
  snrd	wm		23.55749618624393
  spacing	x		0.9375
  spacing	y		0.9375
  spacing	z		1.0
  summary	bg	k	0.8643880129511161
  summary	bg	mad	27.809560775756836
  summary	bg	mean	113.37480926513672
  summary	bg	median	110.73941802978516
  summary	bg	n	3484622.0
  summary	bg	p05	71.00038986206056
  summary	bg	p95	165.68392028808591
  summary	bg	stdv	29.536212921142578
  summary	csf	k	23.600176875771105
  summary	csf	mad	121.83663940429688
  summary	csf	mean	288.9763488769531
  summary	csf	median	290.9056396484375
  summary	csf	n	24002.0
  summary	csf	p05	109.7804588317871
  summary	csf	p95	468.72524871826175
  summary	csf	stdv	116.08077239990234
  summary	gm	k	0.09821162532054517
  summary	gm	mad	69.60385131835938
  summary	gm	mean	590.6179809570312
  summary	gm	median	589.1126708984375
  summary	gm	n	29367.0
  summary	gm	p05	474.419955444336
  summary	gm	p95	710.0435485839844
  summary	gm	stdv	71.61272430419922
  summary	wm	k	0.5187033401175887
  summary	wm	mad	56.87576675415039
  summary	wm	mean	1000.260986328125
  summary	wm	median	999.9805297851562
  summary	wm	n	213977.0
  summary	wm	p05	903.7242065429688
  summary	wm	p95	1097.73955078125
  summary	wm	stdv	59.493003845214844
  tpm	overlap	csf	0.18743422627449036
  tpm	overlap	gm	0.47722047567367554
  tpm	overlap	wm	0.5507605075836182
  wm2max			0.48120830950820503

Visual reports

Provenance information

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.