MRIQC: individual T1w
report
Summary
- Subject ID: 0003.
- Date and time: 2017-08-09, 18:17.
- MRIQC version: 0.9.7.
- Workflow details:
- Detected a zero-filled frame, has the original image been rotated?
- File has no metadata (sidecar JSON file missing or empty)
- Image parameters:
| cjv | 0.30783526950785833 |
| cnr | 4.206527282946631 |
| efc | 0.6730350322847438 |
| fber | 19.53189468383789 |
| fwhm | avg | 3.5334095555555556 |
| fwhm | x | 3.4172266666666666 |
| fwhm | y | 3.681472 |
| fwhm | z | 3.50153 |
| icvs | csf | 0.24151769688326472 |
| icvs | gm | 0.4222688109758763 |
| icvs | wm | 0.336213492140859 |
| inu | med | 1.496488094329834 |
| inu | range | 0.2629909813404083 |
| qi | 1 | 0.0 |
| qi | 2 | 0.0004868274160519931 |
| rpve | csf | 18.255645819093782 |
| rpve | gm | 10.612943645328226 |
| rpve | wm | 16.559573117461834 |
| size | x | 256 |
| size | y | 256 |
| size | z | 162 |
| snr | csf | 2.50601002682856 |
| snr | gm | 8.226228597718137 |
| snr | total | 9.180190392072403 |
| snr | wm | 16.80833255167051 |
| snrd | csf | 6.853141928720625 |
| snrd | gm | 13.87828971124026 |
| snrd | total | 14.762975942068271 |
| snrd | wm | 23.55749618624393 |
| spacing | x | 0.9375 |
| spacing | y | 0.9375 |
| spacing | z | 1.0 |
| summary | bg | k | 0.8643880129511161 |
| summary | bg | mad | 27.809560775756836 |
| summary | bg | mean | 113.37480926513672 |
| summary | bg | median | 110.73941802978516 |
| summary | bg | n | 3484622.0 |
| summary | bg | p05 | 71.00038986206056 |
| summary | bg | p95 | 165.68392028808591 |
| summary | bg | stdv | 29.536212921142578 |
| summary | csf | k | 23.600176875771105 |
| summary | csf | mad | 121.83663940429688 |
| summary | csf | mean | 288.9763488769531 |
| summary | csf | median | 290.9056396484375 |
| summary | csf | n | 24002.0 |
| summary | csf | p05 | 109.7804588317871 |
| summary | csf | p95 | 468.72524871826175 |
| summary | csf | stdv | 116.08077239990234 |
| summary | gm | k | 0.09821162532054517 |
| summary | gm | mad | 69.60385131835938 |
| summary | gm | mean | 590.6179809570312 |
| summary | gm | median | 589.1126708984375 |
| summary | gm | n | 29367.0 |
| summary | gm | p05 | 474.419955444336 |
| summary | gm | p95 | 710.0435485839844 |
| summary | gm | stdv | 71.61272430419922 |
| summary | wm | k | 0.5187033401175887 |
| summary | wm | mad | 56.87576675415039 |
| summary | wm | mean | 1000.260986328125 |
| summary | wm | median | 999.9805297851562 |
| summary | wm | n | 213977.0 |
| summary | wm | p05 | 903.7242065429688 |
| summary | wm | p95 | 1097.73955078125 |
| summary | wm | stdv | 59.493003845214844 |
| tpm | overlap | csf | 0.18743422627449036 |
| tpm | overlap | gm | 0.47722047567367554 |
| tpm | overlap | wm | 0.5507605075836182 |
| wm2max | 0.48120830950820503 |
Visual reports
Provenance information
| md5sum | 1a06f07b688368b053e6d3684e4f7bd2 |
| software | mriqc |
| version | 0.9.7 |
For details on the IQMs (image quality metrics) and further information on
the enclosed plots, please read the
documentation.